怀浩, 宁康, 侯聪, 杨树明, 汪鋆植, 陈士林, 董林林. 火麻仁基原植物bZIP基因家族鉴定及其调控油脂代谢的功能初探J. 药学学报, 2022, 57(8): 2528-2542. DOI: 10.16438/j.0513-4870.2022-0440
引用本文: 怀浩, 宁康, 侯聪, 杨树明, 汪鋆植, 陈士林, 董林林. 火麻仁基原植物bZIP基因家族鉴定及其调控油脂代谢的功能初探J. 药学学报, 2022, 57(8): 2528-2542. DOI: 10.16438/j.0513-4870.2022-0440
HUAI Hao, NING Kang, HOU Cong, YANG Shu-ming, WANG Jun-zhi, CHEN Shi-lin, DONG Lin-lin. The identification of bZIP gene family in Cannabis sativa L. and its preliminary research of the function in regulation of lipid metabolismJ. Acta Pharmaceutica Sinica, 2022, 57(8): 2528-2542. DOI: 10.16438/j.0513-4870.2022-0440
Citation: HUAI Hao, NING Kang, HOU Cong, YANG Shu-ming, WANG Jun-zhi, CHEN Shi-lin, DONG Lin-lin. The identification of bZIP gene family in Cannabis sativa L. and its preliminary research of the function in regulation of lipid metabolismJ. Acta Pharmaceutica Sinica, 2022, 57(8): 2528-2542. DOI: 10.16438/j.0513-4870.2022-0440

火麻仁基原植物bZIP基因家族鉴定及其调控油脂代谢的功能初探

The identification of bZIP gene family in Cannabis sativa L. and its preliminary research of the function in regulation of lipid metabolism

  • 摘要: bZIP (basic leucine zipper) 基因家族是真核生物中最大的转录因子家族之一, 其成员在逆境响应、次级代谢、植物生长、种子发育等方面发挥着重要作用。为探究火麻仁基原植物大麻(Cannabis sativa L.) bZIP (CsbZIP) 基因的生物学功能, 本研究基于大麻全基因组和转录组数据, 利用生物信息学方法对CsbZIP基因家族进行系统性研究。结果表明, 在大麻中鉴定到55个CsbZIP基因家族成员(CsbZIP1~CsbZIP55), 分布在10条染色体上, 属于12个亚家族, 同一亚家族成员之间的基因结构和蛋白基序分布相似。片段重复是CsbZIP基因家族扩张的主要因素。顺式作用元件分析表明73个油脂合成基因的启动子区含有G-box或A-box元件, qRT-PCR实验表明7个CsbZIP基因和7个油脂合成基因在火麻仁中的相对表达量较高。相关性分析表明7个CsbZIP基因和7个油脂合成基因之间存在显著的正相关关系。本研究揭示了CsbZIP基因的结构特征、进化方式和表达模式, 为进一步研究CsbZIP基因对火麻仁油脂代谢的调控提供了重要线索。

     

    Abstract: The bZIP (basic leucine zipper) gene family is one of the largest transcription factor families in eukaryotes, and its members play important roles in stress response, secondary metabolism, plant growth, seed development and other aspects. To investigate the biological functions of the bZIP (CsbZIP) gene in Cannabis sativa L., we systematically investigated the CsbZIP gene family using bioinformatics methods based on the whole-genome and transcriptome data. The results showed that 55 CsbZIP gene family members (CsbZIP1-CsbZIP55) were identified and distributed on 10 chromosomes, belonging to 12 subfamilies. The gene structure and protein motif distribution of the same subfamily members were similar. Segment repeats were the main reasons for the expansion of CsbZIP gene family. Cis-elements analysis showed that the promoter regions of 73 lipid synthesis genes contained G-box or A-box element. qRT-PCR showed that the relative expression levels of 7 CsbZIP genes and 7 lipid synthesis genes were relatively high in hemp seed. 7 CsbZIP genes had a significant positive correlation with 7 lipid synthesis genes. This study revealed the structural features, evolutionary patterns and expression patterns of CsbZIP, providing important clues for further study on the regulation of CsbZIP on oil metabolism of hemp seed.

     

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