高桐, 张文涛, 宋姗姗, 周棣, 刘同超, 缪泽鸿, 熊兵. 小白菊内酯降解剂的设计、合成及生物学研究J. 药学学报, 2023, 58(9): 2715-2726. DOI: 10.16438/j.0513-4870.2023-0228
引用本文: 高桐, 张文涛, 宋姗姗, 周棣, 刘同超, 缪泽鸿, 熊兵. 小白菊内酯降解剂的设计、合成及生物学研究J. 药学学报, 2023, 58(9): 2715-2726. DOI: 10.16438/j.0513-4870.2023-0228
GAO Tong, ZHANG Wen-tao, SONG Shan-shan, ZHOU Di, LIU Tong-chao, MIAO Ze-hong, XIONG Bing. Synthesis, evaluation and proteomic analysis of PROTAC based on parthenolideJ. Acta Pharmaceutica Sinica, 2023, 58(9): 2715-2726. DOI: 10.16438/j.0513-4870.2023-0228
Citation: GAO Tong, ZHANG Wen-tao, SONG Shan-shan, ZHOU Di, LIU Tong-chao, MIAO Ze-hong, XIONG Bing. Synthesis, evaluation and proteomic analysis of PROTAC based on parthenolideJ. Acta Pharmaceutica Sinica, 2023, 58(9): 2715-2726. DOI: 10.16438/j.0513-4870.2023-0228

小白菊内酯降解剂的设计、合成及生物学研究

Synthesis, evaluation and proteomic analysis of PROTAC based on parthenolide

  • 摘要: 小白菊内酯作为药用历史悠久的天然产物, 引起了化学家和生物学家的浓厚兴趣。现有的研究表明其具有抗炎、抗肿瘤等药理活性, 也揭示了其作用于NF-κB信号通路、DNMT1酶及Wnt/β-catenin信号通路等的生物调控功能, 但其确切的生物学靶点仍有待系统阐明。蛋白降解剂为天然产物的靶点发现提供了新的策略, 可通过蛋白组学的考察, 探究细胞中蛋白的全景变化, 从而分析其潜在的靶点。本研究基于这一思路, 以小白菊内酯为母体结构, 设计、合成了20个小白菊内酯降解剂, 测定了其体外抗肿瘤增殖活性, 并优选化合物开展蛋白组学实验, 鉴定出139个下调的差异表达蛋白(DEPs), 对小白菊内酯的作用靶点发现进行了初步探索。

     

    Abstract: As a natural product with a long history of medicinal use, parthenolide has aroused great interest of chemists and biologists. Existing studies have shown that it has anti-inflammatory, antitumor and other pharmacological activities, and also revealed its action on NF-κB signaling pathway, DNMT1 enzyme and Wnt/β-catenin signaling pathway. But its biological targets remain to be elucidated systematically. Proteolysis Targeting Chimeras (PROTAC) provides a new strategy for target discovery of natural products, which can be used to explore the panorama of protein changes in cells through proteomic investigation, so as to analyze their potential targets. Based on this idea, current study designed and synthesized 20 parthenolide-derived degraders. After measured their antitumor activity in vitro, selected compounds were carried out the proteomic experiment. Finally, 139 down-regulated differentially expressed proteins were identified and the discovery of parthenolide interacting protein was preliminarily explored.

     

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