冯杉杉, 郑司浩, 李亚康, 黄林芳. 中药材威灵仙及其伪品DNA条形码鉴别研究J. 药学学报, 2014,49(2): 260-266.
引用本文: 冯杉杉, 郑司浩, 李亚康, 黄林芳. 中药材威灵仙及其伪品DNA条形码鉴别研究J. 药学学报, 2014,49(2): 260-266.
FENG Shan-shan, ZHENG Si-hao, LI Ya-kang, HUANG Lin-fang. Identification of Radix et Rhizoma Clematidis and its adulterants using DNA barcodingJ. Acta Pharmaceutica Sinica, 2014,49(2): 260-266.
Citation: FENG Shan-shan, ZHENG Si-hao, LI Ya-kang, HUANG Lin-fang. Identification of Radix et Rhizoma Clematidis and its adulterants using DNA barcodingJ. Acta Pharmaceutica Sinica, 2014,49(2): 260-266.

中药材威灵仙及其伪品DNA条形码鉴别研究

Identification of Radix et Rhizoma Clematidis and its adulterants using DNA barcoding

  • 摘要: 利用DNA条形码技术对中药威灵仙及其伪品进行鉴别,为威灵仙分子鉴定提供更多依据与参考。本实验利用psbA-trnH序列对来自3个属10个物种的72份威灵仙及其伪品样本进行扩增测序,结合GenBank数据库中7个属21个物种的284条序列,分析ITS、ITS2、psbA-trnH、rbcL、matK各序列种内与种间变异、遗传距离、barcoding gap,并采用最近距离法(nearest distance)和相似性搜索算法(BLAST1)评价5条序列的鉴定成功率。结果显示psbA-trnH序列在两种DNA序列鉴别评价方法中的效率均较高,且该序列种间变异较大,在barcoding gap检验中,其序列重叠区较少,种间与种内变异分布呈两边分开的趋势,NJ树分析可将各物种分开,差异显著。综合鉴别效率和扩增成功率,推荐使用psbA-trnH序列作为威灵仙药材及其伪品的鉴别序列。

     

    Abstract: This study provides the candidate sequences in the identification of Radix et Rhizoma Clematidis and its adulterants using DNA barcoding. We amplified and sequenced the region psbA-trnH, with the data of 284 sequences from GenBank, the differential intra-and inter-specific divergences, genetic distance, barcoding gap were used to evaluate five barcodes, and the identification efficiency was assessed using BLAST1 and Nearest Distance methods. The results showed that psbA-trnH barcodes performed high identification efficiency and inter-specific divergences among the five different DNA barcodes. Analysis of the barcoding gap and NJ tree showed psbA-trnH was superior to other barcodes. Based on the identification and PCR amplification efficiency, psbA-trnH can be the ideal barcode to identify Radix et Rhizoma Clematidis and its adulterants accurately.

     

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